PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050567.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 231aa    MW: 25430.3 Da    PI: 10.4375
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050567.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.5e-0717102654
                   HHHHHHHHHHHHHHHHHHHCTSCC.C.......................................TTS-STCHHHHHHHHHHHHHH CS
           HLH   6 nerErrRRdriNsafeeLrellPk.as....................................kapskKlsKaeiLekAveYIksL 54 
                   + +Er+RR +++s  ++L +l+P+ ++                                    +  +  ls  +  e+A  YI +L
  EcC050567.10  17 KTVERNRRIHMKSLCFKLASLVPShQPrsapkvkpprasvfalpvrgfsppafvlsgkihrgvSRFQDMLSQQDQIEQAAAYIAQL 102
                   679*********************55598888888888888888888888888888888877766667788888888888888777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.2E-81639IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.55E-71741IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-879124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.55E-781123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MKKKSSSSSD SIKPDRKTVE RNRRIHMKSL CFKLASLVPS HQPRSAPKVK PPRASVFALP  60
VRGFSPPAFV LSGKIHRGVS RFQDMLSQQD QIEQAAAYIA QLKEKVEMLK AKKELAEARL  120
DVSRRRGGGE CGPAFDGAAA RQASALPFVS IRDWDSGIEV TLISGCGASK NFMLYEVIGI  180
LEEEGAEVVS ASISNIGDKV FYTLHAQVRL SRVGVETSRV SQRLHELVYS F
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028270.11e-123PREDICTED: transcription factor ORG2-like
TrEMBLA0A059CZ331e-123A0A059CZ33_EUCGR; Uncharacterized protein
STRINGVIT_17s0000g08150.t014e-64(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.11e-27bHLH family protein